Materials Notes
SpecialEquipment3-5FreshPigBrains 1MGTP 1MMagnesiumSulfate PMbuffer= 100mMPipes,pH6.92mMEGTA1mMMagnesiumSulfate2mMDTT PM-4MBuffer= 100mMPipes,pH6.92mMEGTA1mMMagnesiumSulfate2mMDTT4MGlycerol PM-8MBuffer= 100mMPipes,pH6.92mMEGTA1mMMagnesiumSulfate2mMDTT8MGlycerol0.1mMGTP PCColumn(20mLphosphocelluloseresinin2.5cmdiametercolumn)equilibratedinPMbuffer
ProcedureWaringBlender Douncehomogenizer(15mL) 1. Obtainpigbrainsandmeasuretheweight.Keeponice. 2. Workingrapidly,removemeningesandbloodvesselswithKimwipesat4°C.Prepareenoughspaceincoldroomfor2-3personsworkingtogetheratthisstep.(Needbenchcover,trashbag,Waringblender,300mlbeakerinicebucket.) 3. Mincethetissuesrapidlywithscissorsthathavebeenrinsedwithethanol,thenaddPM-4Mbufferataratioof100mlper100goftissue(saveathirdtorinsetheblenderjar),andhomogenizethetissueinaprecooledWaringblenderatthelowestspeedfor40sec.TransferthemixtureintoanewbeakerandrinseouttheblenderjarwithsmallvolumeofthePM-4Mbuffer. 4. Centrifugethehomogenatefor15minat4°Cat9500rpmintheSorvallSS-34rotor(6500g). 5. Decantthesupernatantsinto30mlBeckmanultracentrifugetubesoniceandcentrifugeat30000rpminaBeckmanTi70rotor(96000g)for75minat4°C. 6. Decantthesupernatantsintoagraduatedcylinderandcheckthevolume(V1). 7. Add1MGTPtoafinalconcentrationof0.5mMandmixgentlybyinvertingthecylinderserveraltimes.Transferintonew30mlultracentrifugetubes. 8. Balancethetubesandincubatefor45mininawaterbathat34°C(thesolutionatthisstageispinkish).Duringtheincubation,warmtheTi70rotorwithtapwaterandsettheultracentrifugetemperatureto27°C. 9. Centrifugethetubesfor60minat27°Cat30,000rpmtopellettheassembledmicrotubules. 10. Atroomtemperature,decantthesupernatantsfromthefirmandslightlyopalescentpellets. 11. ResUSPendthepelletsinavolumeof0.25xV1ofice-coldPMbuffer. 12. Removethepelletsfromthebottomsofthetubebygentlyscrapingwithaglassrod.Pourtheresultingsuspensionintoanice-coldDouncehomogenizerandhomogenizeusing5gentlestrokesofthepestletoproduceauniformsuspension. 13. Incubatethesuspensiononicefor30mintodepolymerizemicrotubules. 14. Transferintoice-coldultracentrifugetubesandcentrifugeat30000rpmat4°Cfor60mininaBeckmanTi70rotor. 15. Carefullyremovethesupernatantsfromthepellets,whicharesometimesloose,andpoolinagraduatedcylinder.Notethevolume(V2).
Nextday16. AddanequalvolumeofPM-8M,mixgentlyandstoreat-20°C.Thetubulinatthisstagecanbestoredaslongas72hrs. 17. Asecondcycleofpolymerization/centrifugationanddepolymerization/centrifugationiscarriedoutbyfirstincubatingthemixtureat34°Casdescribedabove(steps8-10).Resuspendtheresultingpelletsin0.25xV2ofcoldPMbuffer,incubateatonicefor30minandcentrifugeagain(steps11-15). 18. Theresultingcoldsupernatantis~90%puretubulinandiscalledtwice-cycledtubulin.Furtherpurificationisbyphosphocellulosecolumnchromatography. 19. PrepareaPCcolumn(20mLPCresinin2.5cmdiametercolumn)andequilibratethecolumninPMbuffer. 20. Priortocollection,1MMagnesiumSulfateisaddedtothecollectiontubestomakeafinalconcentrationof1mM. 21. Applythetwice-cycledtubulintothePCcolumnandeludethecolumnwithPMbufferataflowrateof15mLperhourcollecting0.5-1mLfractions.Thefirsteluateispurifiedtubulinprotein.Donotmixwithlaterpeakfractions,whichcontainmicrotubule-associatedproteins(MAPs).Poolthepurifiedtubulin+/-MAPs,divideinto0.5mLaliquots,freezeinliquidnitrogenandstoreat-80°C. 1. TubulinislABIleandyieldswillbegreatlyimprovedbyworkingrapidlyintheinitialstepsofthepreparation.