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Isolation of Protein from Tissue
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IsolationofProteinfromTissue

  1. Placethetissuesonlabeledaluminumfoilandimmediatelyplaceindryice.Itisimperativethatthetissuesstaycoldsothatproteasedonothavetimetoactontheprotein.
  2. PlacethetissuesinaroundbottomtubeandaddBrijbufferwithproteaseinhibitorsadded.Addabout1mlBrij/tissuesthatequalsabout100µlinvolume.Brijwithinhibitorsonicebeforeuse.Brij150(Lysisbuffer)
    Tris1M1ml
    EDTA0.5M0.4ml
    NaCl5M3ml
    Brij9610%8.75ml
    NP4010%1.25ml
    QSto100mlwithH2O.Proteaseinhibitors(addtotheamountthatyouwillneed).Keepthesolutiononiceafteradditionofinhibitors.
    Leupeptin1:1000
    Aprotinin1:1000
    AEBSF1:1000
    (For10mluse10µlofeachinhibitor.)
  3. Usetheblendertodispersetissuesintothebuffer.useforabout5secondsandthenplacethesamplesoniceagaintokeepitfromgettingwarm.WashtheblenderbetweensampleswithPBS.
  4. Whensamplesareinsolution(orascloseasyoucangetthem),transferto1.5mlEppendorftubesandcentrifugeinthecoldroomfor10minutesatfullspeed.Removethesupernatantwhichcontainstheproteinandplaceinaneweppendorfonice.
  5. DoaproteinassayusingELISAreader.
  6. Storeremainderofsampleat-20°Cinanon-frost-freefreezer.Freezingandthawingofproteinsamplesdegradesthem.Labelsampleswithdateorexperimentnumberandproteinconcentration,ifknown.
  7. Thawsamplesonice.Remove50µlofprotein,inaneweppendorftube.Freezeremainderofsamples.Bringsamplesupto25µlwithBrijbufferandequalamountof2Xreducingbuffer.AlsomakeatubeofMarkersbyusing10µlofrainbowmarker,15µloflysisbuffer,and25µlofreducingbuffer.Boilsamplesfor5minutesusingatubeholderwhichkeepsthelidsfrompoppingoff.Centrifugebrieflytocollectsampleatbottomoftube.Itisnownotcrucialtokeepthesamplescold.Theyarestableafteradditionofreducingbuffer.Iusuallystorethemoniceanywayuntilreadytoloadonthegel,though.

PreparationofProteinLysatesfromLymphoblastsorFibroblasts

Collectcells(lymphoblastorfibroblast)fromtissuecultureflaskandwash3timeswith1Xphosphatebuffersaline(PBS),pH7.4.Iadd100µlBrijbuffer(forcellscollectedfrom75mmflask).Sonicatethecellpelletsfor45secondsandkeepthepelletonicefor2minutes.Repeatsonicationtwomoretimes.keepthepelletimmediateaftersonicationonice.hereonwardspelletshouldbeonice,otherwiseproteinwillbedegraded,andquicklyso.Afterthreesonications,spinthelysateat14000RPMfor10minutesinthecoldroomusingamicrocentrifuge.Nowtheproteinlysateisreadytoship.Ifyouareshippingoverseaspleaseuseenoughdryiceinyourshippingbox.

Ifyouwanttorunawestern,assaytheproteinusingelisamethodoranyothermethod.Forlongerstorage,pleasestoreproteinlysatesin-80°C.Foranimmediatewestern,takeequalvolumesofproteinlysatesand2Xreducingbuffer(loADIngdye),boilthelysateswithreducingsolutionfor5minutesandthencoolitdown.Spinagaintheproteinlysatefor5minutesat14000RPMinthecoldroomandthenloadonagel.Alwaysuserainbowmarkeroranyotherproteinmarkertoestimatetheproteinsizes.

Proteinlysatebuffer(Brijbuffer):

Tris1M1ml
EDTA0.5M0.4ml
NaCl5M3ml
Brij9610%8.75ml
NP4010%1.25ml

Makeupto100mlwithddH2O.

Proteaseinhibitors:

Leupeptin25µM
Aprotinin25µM
AEBSF25µM

For100mlBrijbufferadd100µlofatleasttwoproteaseinhibitors.

Reducingsolution:

Bromophenolbluepinch
0.5MTrispH6.82.5ml
Glycerol2.0ml
10%SDS2.0ml
ddH2O2.5ml
Beta-mercaptoethanol1ml
TOTAL10ml

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